|
OEAV000274
|
hCoV-19/pangolin/Guangdong/1/2019 |
EPI_ISL_410721 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-01-18 |
Manis javanica |
29825 |
2020-02-18 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Lihua Xiao, Wu Chen |
South China Agricultural University |
|
29825 |
100.00 |
|
OEAV000275
|
hCoV-19/pangolin/Guangxi/P1E/2017 |
EPI_ISL_410539 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2017-07-02 |
Manis javanica |
29801 |
2020-02-17 |
Intestine tissue |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
Beijing Institute of Microbiology and Epidemiology |
20 Dongda Street, Fengtai District, 100071 Beijing, China |
Wu-Chun Cao; Tommy Tsan-Yuk Lam; Na Jia; Ya-Wei Zhang; Jia-Fu Jiang; Bao-Gui Jiang |
Beijing Institute of Microbiology and Epidemiology |
|
29801 |
100.00 |
|
OEAV000276
|
hCoV-19/pangolin/Guangxi/P2V/2017 |
EPI_ISL_410542 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2017-07-02 |
Manis javanica |
29795 |
2020-02-17 |
Mixed lung and intestine tissue |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
Beijing Institute of Microbiology and Epidemiology |
20 Dongda Street, Fengtai District, 100071 Beijing, China |
Wu-Chun Cao; Tommy Tsan-Yuk Lam; Na Jia; Ya-Wei Zhang; Jia-Fu Jiang; Bao-Gui Jiang |
Beijing Institute of Microbiology and Epidemiology |
|
29785 |
99.97 |
|
OEAV000277
|
hCoV-19/pangolin/Guangxi/P4L/2017 |
EPI_ISL_410538 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2017-07-02 |
Manis javanica |
29806 |
2020-02-17 |
Lung tissue |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
Beijing Institute of Microbiology and Epidemiology |
20 Dongda Street, Fengtai District, 100071 Beijing, China |
Wu-Chun Cao; Tommy Tsan-Yuk Lam; Na Jia; Ya-Wei Zhang; Jia-Fu Jiang; Bao-Gui Jiang |
Beijing Institute of Microbiology and Epidemiology |
|
29805 |
100.00 |
|
OEAV000278
|
hCoV-19/pangolin/Guangxi/P5E/2017 |
EPI_ISL_410541 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2017-07-02 |
Manis javanica |
29806 |
2020-02-17 |
Intestine tissue |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
Beijing Institute of Microbiology and Epidemiology |
20 Dongda Street, Fengtai District, 100071 Beijing, China |
Wu-Chun Cao; Tommy Tsan-Yuk Lam; Na Jia; Ya-Wei Zhang; Jia-Fu Jiang; Bao-Gui Jiang |
Beijing Institute of Microbiology and Epidemiology |
|
29802 |
99.99 |
|
OEAV000279
|
hCoV-19/pangolin/Guangxi/P5L/2017 |
EPI_ISL_410540 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2017-07-02 |
Manis javanica |
29806 |
2020-02-17 |
Lung tissue |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
Beijing Institute of Microbiology and Epidemiology |
20 Dongda Street, Fengtai District, 100071 Beijing, China |
Wu-Chun Cao; Tommy Tsan-Yuk Lam; Na Jia; Ya-Wei Zhang; Jia-Fu Jiang; Bao-Gui Jiang |
Beijing Institute of Microbiology and Epidemiology |
|
29806 |
100.00 |
|
OEAV12521307
|
hCoV-19/HongKong/VM22000138_HKUVOC0589P2/2022 |
EPI_ISL_9773743 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2022-01-03 |
Manis javanica |
29850 |
2022-02-11 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
School of Public Health, HKU |
|
Samuel MS Cheng, HaoGao Gu, Leo LM Poon, Malik Peiris |
The University of Hong Kong School of Public Health |
|
29828 |
99.93 |
|
OEAV143260
|
hCoV-19/pangolin/Guangdong/P2S/2019 |
EPI_ISL_410544 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2019-07-02 |
Manis javanica |
29769 |
2020-02-17 |
Scale |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
Beijing Institute of Microbiology and Epidemiology |
20 Dongda Street, Fengtai District, 100071 Beijing, China |
Wu-Chun Cao; Tommy Tsan-Yuk Lam; Na Jia; Ya-Wei Zhang; Jia-Fu Jiang; Bao-Gui Jiang |
Beijing Institute of Microbiology and Epidemiology |
|
21478 |
72.15 |
|
OEAV143261
|
hCoV-19/pangolin/Guangxi/P3B/2017 |
EPI_ISL_410543 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2017-07-02 |
Manis javanica |
29801 |
2020-02-17 |
Blood |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
Beijing Institute of Microbiology and Epidemiology |
20 Dongda Street, Fengtai District, 100071 Beijing, China |
Wu-Chun Cao; Tommy Tsan-Yuk Lam; Na Jia; Ya-Wei Zhang; Jia-Fu Jiang; Bao-Gui Jiang |
Beijing Institute of Microbiology and Epidemiology |
|
27360 |
91.81 |
|
OEAV192113
|
hCoV-19/pangolin/Guangdong/A22-2/2019 |
EPI_ISL_471467 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-05-22 |
Manis javanica |
29803 |
2020-06-22 |
lung tissue |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Wu Chen |
South China Agricultural University |
|
29778 |
99.92 |
|
OEAV192114
|
hCoV-19/pangolin/Guangdong/FM45-9/2019 |
EPI_ISL_471468 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-05-22 |
Manis javanica |
29762 |
2020-06-22 |
muscle tissue |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Wu Chen |
South China Agricultural University |
|
27847 |
93.57 |
|
OEAV192115
|
hCoV-19/pangolin/Guangdong/SM44-9/2019 |
EPI_ISL_471469 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-05-22 |
Manis javanica |
29742 |
2020-06-22 |
Muscle tissue |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Wu Chen |
South China Agricultural University |
|
29356 |
98.70 |
|
OEAV192116
|
hCoV-19/pangolin/Guangdong/SM79-9/2019 |
EPI_ISL_471470 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-05-22 |
Manis javanica |
29780 |
2020-06-22 |
Muscle tissue |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Wu Chen |
South China Agricultural University |
|
29681 |
99.67 |
|
OEAV192117
|
hCoV-19/pangolin/Guangdong/cDNA16-S/2019 |
EPI_ISL_471463 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-05-22 |
Manis javanica |
3798 |
2020-06-22 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Lihua Xiao, Wu Chen |
South China Agricultural University |
|
3798 |
100.00 |
|
OEAV192118
|
hCoV-19/pangolin/Guangdong/cDNA18-S/2019 |
EPI_ISL_471464 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-05-22 |
Manis javanica |
3798 |
2020-06-22 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Lihua Xiao, Wu Chen |
South China Agricultural University |
|
3798 |
100.00 |
|
OEAV192119
|
hCoV-19/pangolin/Guangdong/cDNA20-S/2019 |
EPI_ISL_471465 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-05-22 |
Manis javanica |
3798 |
2020-06-22 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Lihua Xiao, Wu Chen |
South China Agricultural University |
|
3798 |
100.00 |
|
OEAV192120
|
hCoV-19/pangolin/Guangdong/cDNA31-S/2019 |
EPI_ISL_471466 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-05-22 |
Manis javanica |
3798 |
2020-06-22 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Lihua Xiao, Wu Chen |
South China Agricultural University |
|
3798 |
100.00 |
|
OEAV192121
|
hCoV-19/pangolin/Guangdong/cDNA8-S/2019 |
EPI_ISL_471461 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-05-22 |
Manis javanica |
3798 |
2020-06-22 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Lihua Xiao, Wu Chen |
South China Agricultural University |
|
3798 |
100.00 |
|
OEAV192122
|
hCoV-19/pangolin/Guangdong/cDNA9-S/2019 |
EPI_ISL_471462 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2020-05-22 |
Manis javanica |
3798 |
2020-06-22 |
|
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
South China Agricultural University |
483 Wushan Road, Tianhe District, 510642 Guangzhou, China |
Yongyi Shen, Lihua Xiao, Wu Chen |
South China Agricultural University |
|
3798 |
100.00 |
|
OEAV349691
|
hCoV-19/pangolin/Yunnan/MP20/2017 |
EPI_ISL_610156 |
RNA virus |
Severe acute respiratory syndrome coronavirus 2 |
China |
2017-08-29 |
Manis pentadactyla |
28823 |
2020-11-03 |
Muscle |
2697049 |
Severe acute respiratory syndrome-related coronavirus |
Betacoronavirus |
Coronaviridae |
GISAID |
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences |
No. 21 Qingsong Road, Cuba, Kunming, Yunnan Province, China |
Jian-Bo Li, Hang Liu, Ting-Ting Yin, Min-Sheng Peng, Ya-Ping Zhang |
State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences |
7.24x (average) |
12022 |
41.71 |